Class Schedule: | T,Th 11:30-12:45 | ||
Class Location: | Student Union 120 | ||
Professor: | Dr. Eugene Quinn | ||
Email: | equinn1@stonehill.edu | ||
Office Hours: | Office: Duffy 241 |
General Information | Announcements | Syllabus | Notes and Handouts | Software | Assignments | Policies | Grading |
1/10/2014 | Stonehill College is committed to providing all students equal access to learning opportunities. The Center for Academic Achievement is the campus office that works with students who have disabilities to provide and/or arrange reasonable accommodations. Students registered with The Center, who have a letter requesting accommodations, are encouraged to contact the instructor early in the semester. Students who have, or think they may have, a disability (e.g. psychiatric, attentional, learning, vision, hearing, physical, or systemic), are invited to contact The Center for Academic Achievement for a confidential discussion at 508-565-1208. |
Solar image courtesy of NASA
Assignment Number | Date Due | Assignment |
Date | Description | |
1/27/2014 | sample_size.r Main program loop for the Bernoulli sample size exercise. | |
1/23/2014 | frequentist_main_loop.r Main program loop for the frequentist Bernoulli exercise. | |
1/22/2014 | JAGS_test.r Short R program to test JAGS and RJAGS installation. | |
1/21/2014 | test_sweave.zip Compressed folder containing the sweave file for Law of Large Numbers exercise: law_of_large_numbers.Rnw |
Because some items are not available in the computer lab, you should install all of the programs listed on your personal computer (they are all free).
We will have an install-a-thon on the first day class meets, so be sure to bring your computer.
There are some dependencies among the programs listed, so try to install them in the following order:
Item | Description | Links |
LaTeX (pronounced "la-tech") | LaTeX is the gold standard for typesetting documents containing scientific and math notation. We will use LaTeX in conjunction with the Sweave R package to produce composite documents. | My LaTeX page. Mac users should install MacTex, windows users should install MikTex. |
JAGS ("Just Another Gibbs Sampler") | A package for performing Markov Chain Monte Carlo (MCMC) simulation | mcmc-jags.sourceforge.net |
The R statistical computing system | Open-source statistical computing system. R currently has over 5,000 packages and tends to be the place cutting-edge techniques show up first. | Instructions for downloading and installing the R statistical computing environment (for windows, but Mac is similar). |
Rstudio | Integrated development environment (IDE) for R | www.rstudio.com |
The rjags R package | rjags provides an interface to JAGS from within R | Once you have R working, enter the following command: install.packages("rjags") then choose a mirror site (any one will do) to download this package. R and JAGS must be already installed. |
Python | Python has become the "Swiss Army Knife" of data extraction and manipulation, combining ease of use and power. | python.org is the official Python website. It is recommended that you install the latest version of Python 2 as package support in Python 3 is still somewhat spotty. |
Spyder | An IDE for Python. | Spyder provides editing and testing capabilities for developing Python programs. |
SAS | The SAS system | SAS is a large commercial software package that is very widely used for data analysis. SAS makes their system available to students and faculty for the duration of a course. You will need to register with SAS and indicate that you are enrolled in MTH225-A Section 1. Detailed instructions for registering can be found here. We will be using their web client, so no software needs to be installed on your computer. |
Final grades will be determined from test, quiz, and assignment grades, according to the following table:
Quizzes | 20% |
Midterm | 10% |
Cumulative final | 25% |
Homework and In-Class Group Assignments | 45% |
Exact dates will depend on our progress and will be announced well in advance.
These include:
All members of the College community have the responsibility to abide by the College's Academic Integrity policies. This responsibility includes reporting known or suspected violations of this policy to the appropriate faculty
member or to the Dean of the Faculty in the Office of Academic Affairs.
Violations include, but are not limited to the following:
(Page 108 of The Hill Book )
The policies listed under Class Attendance on page 108 of The Hill Book apply;
Note in particular the following:
(Page 108 of The Hill Book - note exceptions for prolonged illness and conflicts with religious beliefs)
My idea of legitimate absences includes:
The value of the final examination is determined by the instructor. If a student misses the examination without sufficient reason, a grade of F is given for this part of the course requirements. The semester grade is then determined in the same way as for students who took the examination.
(Page 109 of The Hill Book)
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